rs31521556 SNP Detail

Summary

• ID
  rs31521556
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:68951283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTT ATTATTGCTA TGATGAAAAA
  Y
  CATTACCACA AGCAACTCAT TGAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45041371	mCV25025411	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss144624938	ENSMUSSNP704048	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss319776959	CHEV_1_68958698	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31521556					SNP	T	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:68951283 () rs orientation: forward

Symbol	Name	Function Class
Erbb4	erb-b2 receptor tyrosine kinase 4	within coordinates
Tssr12045	transcription start site region 12045	1219 bp upstream