rs3152253 SNP Detail

Summary

• ID
  rs3152253
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:120475699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAACCTGG CAGGAGATAG
  AGACCAAAGC AGGAGACTCA GCTCACTGAG GACTTGACAC TGCTCGGCAC TCTCAGAGAA
  CAGGTGCTGC ATCTCCGCAG ATACAGAGAG CTCTTATAGA GCCCAGGGTG TGCCCTGAGC
  TGCCCAGTGA GTCTCATGGT GATGCTGCCA TCGACGGTGC TTTCAGCCTG AGCTAGGTGC
  Y
  GGGGCTCCAT GGATTTTCTC TGAAAGGGGG AGCAAGTTCC TTTCAGGATT CGGGAAGCCA
  GCAAGCACTG AGTGGTGTGG ATAGTAGACT AAGTTCCGTG TCTCCATCAC CTAAGCCTGA
  GTCAGGAGCC AGGCAGTAAG GCCTACCTAA GATGAGAGCC ATTCTGAAGG AAAGGATGTT
  GGCAGGAAGC TGGGCTTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45940385	mCV22980387	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss133595567	ENSMUSSNP4464143	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321929895	CHEV_6_120448756	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs3152253					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:120475699 () rs orientation: forward

Symbol	Name	Function Class
Gm67209	predicted gene, 67209	within coordinates
Rr132708	regulatory region 132708	1899 bp distal
Rr138575	regulatory region 138575	1898 bp distal