rs31524167 SNP Detail

Summary

• ID
  rs31524167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:144419141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGATTGG GAGAGATATT
  AAAATGACAA ACGTGTCTGC AAGCACCTGT GTCTGCTTTG TCTTTTTTCT ATTTGCAGCT
  GAGCAGAGTG GGAGCAAGGA AACTAGTTTT AGCCAGCTGT GTGCACACAC AAATGTGGCT
  TGGAAAATAG TCCCAGAGGC AAAGGTATAT CACAAAGTTT TACCGCATCC TGTGTCTCCC
  Y
  TCAGTGGGGT TCTGTGGCTG CCCACTCAGT CACTAACCCG GGTGTAAGGG TCTGTGTCCA
  CACGGTGAAT ACTTACCCCA TGAAGCACAA TGAGGCAGAA GCTGGCCAGG AGGAGCACAG
  TCAACACATA TGTTTGACTT CAGCCAACTG CTCTCAGTGA AGATATGAAA TCATATAAGT
  CATCAAAGAT ACCAGATCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss46041988	mCV24316814	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145992544	ENSMUSSNP5424329	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T		C
ss322484939	CHEV_7_152051309	CHEVERUD	SCREENING_POP	f	SNP					T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs31524167					SNP	T	T	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:144419141 () rs orientation: forward

Symbol	Name	Function Class
Fgf4	fibroblast growth factor 4	159 bp downstream
Rr366758	regulatory region 366758	107 bp downstream