rs31524597 SNP Detail

Summary

• ID
  rs31524597
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:172028982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCA GTTCCCAGGC AGGCTGGGTG
  R
  TGGGGGGAGG GGAGTTGAGA TGTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45042053	mCV23615015	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss120007299	PARCsnp_1.17728	PARC_SEQ	INBRED	f	SNP			G	A
ss120010198	PARCsnp_1.07366	PARC_SEQ	INBRED	f	SNP			G	A
ss146183737	ENSMUSSNP1642983	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss320123176	CHEV_1_174131546	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31524597					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172028982 () rs orientation: forward

Symbol	Name	Function Class
Pea15a	proliferation and apoptosis adaptor protein 15A	within coordinates
Tssr15161	transcription start site region 15161	913 bp upstream
Tssr15162	transcription start site region 15162	860 bp upstream
Tssr15163	transcription start site region 15163	826 bp upstream