rs31525437 SNP Detail

Summary

• ID
  rs31525437
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19191525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGGAGCA GGGTCCTTCG
  GCTGTGAGGG GAGGAAGACC CTGGCATGGG AACCAGAGGA TCTGGGCTCA GTAAACTCCC
  AGATGTCAGG GCTAAAGGCC CAGGCAGGGC AGAGTAAAGG GAGAGGGGAA GGCTTAGGGC
  CTGTGGAGGG CAGAAAGCTG AGGAGGGGGG GTTTCTTCCA GAAAGCCCAA CATCCAGCAA
  R
  GAAAGGGGGC TCGAGTTAGC AGGGGGTGTG AGGAGGGGGT GAGGAGGTGA GACTGGGGAG
  AGCCTCAGGA GGCGACCAGA GTCAGCCTAG TCTGGGGCCT GGAACCCTAG TCTTGGATGG
  GAGGAAGCCC GCAGGGTTGG AAGCCAAGGC TTCCCTTAGA AAGACTGGAC GGGTCCCACC
  AAGGGGACCC CAGAGGCGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss46041060	mCV22659348	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss148476682	ENSMUSSNP2182834	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs31525437					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19191525 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18489	CpG island 18489	165 bp proximal
Mark4	MAP/microtubule affinity regulating kinase 4	within coordinates
Rr400149	regulatory region 400149	1156 bp upstream
Rr643146	regulatory region 643146	within coordinates
Rr643147	regulatory region 643147	1211 bp proximal
Tssr64858	transcription start site region 64858	1330 bp upstream
Tssr70918	transcription start site region 70918	1072 bp downstream
Tssr70919	transcription start site region 70919	1128 bp downstream
Tssr70920	transcription start site region 70920	1148 bp downstream
Tssr70921	transcription start site region 70921	1179 bp downstream
Tssr70922	transcription start site region 70922	1201 bp downstream
Tssr70923	transcription start site region 70923	1635 bp downstream