rs31525526 SNP Detail

Summary

• ID
  rs31525526
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52315215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGGCGGAT TTCTGAATTT GAAGCCAGCC TGGTCTACAG
  AGTGAGTTCC AGACAGCCAG GGCTATACAG AGAAACCCTG TCTCGAAAAA CGAAAGAGAG
  R
  AGAGGGAGAA GGAGGGGAGA GGGGAGGGGA GGAGAGGAGA GAAGAGGGGA AGGGAGGGAA
  GGAGAGGAGA GAAGACGGGA AGGGGGGAGG GGAGAGGAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss39297801	mCV22964256	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss139500753	ENSMUSSNP5484412	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31525526					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52315215 () rs orientation: forward

Symbol	Name	Function Class
Hnrnpc	heterogeneous nuclear ribonucleoprotein C	within coordinates
Rr289029	regulatory region 289029	1386 bp proximal
Tssr128488	transcription start site region 128488	272 bp downstream
Tssr128489	transcription start site region 128489	1768 bp downstream