rs31526138 SNP Detail

Summary

• ID
  rs31526138
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126219414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGAGGCTG GGAATCCTTT
  CAGCTACGGA AATCTGAGAA GTTTCTGGAA GGCCCTGAAG GGAAAGATTC TGTCAGTGAT
  TTCTCTAGTT CTACTAAGGA ATCCCCGAAA CTGAGAGAAT CAGACATTAT ATGCACGAGA
  TGAAAACGGG GTGGAAAAGA GGGACATTCT GCCCAGGGTC CTTCCTGATC TGAGATCTCC
  R
  AGGTTCTAAG AATTGCTGTA ACAGTTCCTG GCACAGAGGC TGTGCCAGAG ACAGGTGAGG
  CAGAGGGCTG TCAATCAAAG GTTAAGAGTA AGTGGTGGCG TGTTCATCTC CTAAGAAGCA
  GGTGCTCAAG GGTCCAGCAG CTAGGACTGG CCATTGACAC TGAGGACGGG TGTTCTTGAC
  CTTAATTTTC TGTCTGACGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46041813	mCV22749706	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss145875030	ENSMUSSNP2443302	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31526138					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126219414 () rs orientation: forward

Symbol	Name	Function Class
Gm39086	predicted gene, 39086	1761 bp upstream
Gm39087	predicted gene, 39087	1457 bp upstream
Rr655535	regulatory region 655535	383 bp distal
Rr655536	regulatory region 655536	1218 bp proximal
Rr655537	regulatory region 655537	1651 bp proximal