rs31526275 SNP Detail

Summary

• ID
  rs31526275
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153627036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGT AGAACTCTCA GATCTGCCTG
  Y
  ACCATGCCTG CCTGGATACT GCCAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45042170	mCV24629809	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs31526275					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153627036 () rs orientation: forward

Symbol	Name	Function Class
Gm28512	predicted gene 28512	within coordinates
Gm28513	predicted gene 28513	1966 bp upstream
Rnasel	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	within coordinates
Rr396399	regulatory region 396399	1710 bp downstream
Rr396400	regulatory region 396400	406 bp upstream
Tssr9479	transcription start site region 9479	1848 bp downstream
Tssr9480	transcription start site region 9480	1799 bp downstream
Tssr9481	transcription start site region 9481	1767 bp downstream
Tssr9482	transcription start site region 9482	1544 bp downstream
Tssr9483	transcription start site region 9483	576 bp upstream
Tssr9484	transcription start site region 9484	591 bp upstream
Tssr9485	transcription start site region 9485	656 bp upstream
Tssr9486	transcription start site region 9486	712 bp upstream
Tssr9487	transcription start site region 9487	1493 bp upstream
Tssr9488	transcription start site region 9488	1520 bp upstream
Tssr9489	transcription start site region 9489	1562 bp upstream
Tssr9490	transcription start site region 9490	1698 bp upstream