rs31527277 SNP Detail

Summary

• ID
  rs31527277
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191628150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAA AAAGGGGGGC TATGGGAATG
  Y
  TCTAAGCAAA ATGAGGGGAG AGGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45043391	mCV22569618	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss146512039	ENSMUSSNP4993476	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31527277					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191628150 () rs orientation: forward

Symbol	Name	Function Class
1700034H15Rik	RIKEN cDNA 1700034H15 gene	within coordinates
Rr426251	regulatory region 426251	1273 bp distal
Rr426252	regulatory region 426252	1504 bp distal
Rr426253	regulatory region 426253	835 bp proximal