rs31540184 SNP Detail

Summary

• ID
  rs31540184
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:118452618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACCA TTCTACCCAG TCCCAGCCTG
  Y
  GGTCCGAGAG AAAGGGAAAC AGCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46042996	mCV23653528	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31540184					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:118452618 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19628	CpG island 19628	1714 bp proximal
Knop1	lysine rich nucleolar protein 1	within coordinates
Rr654562	regulatory region 654562	1498 bp distal
Rr654563	regulatory region 654563	1668 bp proximal