rs31544763 SNP Detail

Summary

• ID
  rs31544763
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:38524832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATAAGAGCTA AGGGGTTAGC TCAATGGTGG AGCTCCCCAG
  CCTAACATGT GGGAAGGTCA TTTATGTAGC AAGTAATGCT AGATCTAGCA TGTTCTAAAT
  K
  ATCTTGGACT ACATACTGAC ATATCTGCCA GTCATTTTGC TAATAAATTA TTCAATTCTT
  TAAAAAAATC CAGACTTTAA TAAAAATATT GTTATCTGA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45544522	mCV22716312	ABI	CRAMUS_MOUSE	f	SNP			G	T
ss134836974	ENSMUSSNP858994	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		T
ss320719848	CHEV_3_38369605	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31544763					SNP	G	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38524832 () rs orientation: forward

Symbol	Name	Function Class
Ankrd50	ankyrin repeat domain 50	Intron
Rr575672	regulatory region 575672	886 bp proximal