rs31545052 SNP Detail

Summary

• ID
  rs31545052
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:69027346 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAC AAATGCCAAC CAATCCTTAC
  R
  AAATAATCAT CCCTGGAGCT ATACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45544424	mCV24616054	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss135265101	ENSMUSSNP6943083	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320791939	CHEV_3_68923935	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31545052					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69027346 () rs orientation: forward

Symbol	Name	Function Class
Gm37558	predicted gene, 37558	within coordinates
Kpna4	karyopherin subunit alpha 4	Intron
Rr578128	regulatory region 578128	764 bp distal