rs31546135 SNP Detail

Summary

• ID
  rs31546135
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:163183810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGTAAAAAG AGCCTTAATT GCCCAGCGGA AACTGGTAGA
  GATCTGCTGT AAATTACATG AGAATTTTAC CCAAAGACTT AACATTCCCC CCGCCCCCTT
  R
  CCCCCGCTTG CACAGTTTTG CTTGAAAGTA TGGCCTTATG ACTGGTCTCA GGATGGATAT
  CAGATATCTC ACCCTGAAGG GAGAAACATT CCCACCAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45043920	mCV23470636	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss145957024	ENSMUSSNP145858	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31546135					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:163183810 () rs orientation: forward

Symbol	Name	Function Class
Rr846	regulatory region 846	within coordinates
Rr422079	regulatory region 422079	within coordinates
Rr422080	regulatory region 422080	1927 bp proximal