rs31548733 SNP Detail

Summary

• ID
  rs31548733
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9893171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCC ATTCCATAAA GTGCACAGGG
  R
  CTCAAATGCT CTGTGTTTTA ATAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45546344	mCV23605645	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss134577480	ENSMUSSNP5790359	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31548733					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9893171 () rs orientation: forward

Symbol	Name	Function Class
Gm55352	predicted gene, 55352	1509 bp downstream
Pag1	phosphoprotein associated with glycosphingolipid microdomains 1	within coordinates