rs31549774 SNP Detail

Summary

• ID
  rs31549774
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82984433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCGCAGGAA GGCGGGGCCT CGGTGGGCGG TGTCGCTTGA
  AGGGGCGGGG CTGGCGCTAA AACTGGGGCT AAGGAGACGG AAGCCGGTGG GGACGGGAAG
  R
  ACCTGGAGGG AAAGTCCTGA GCGGGACGCA AGAGGCGGGG CGTGAGCTTC TGAGTCCTTC
  CAGTTCCTGT GACCTCCTCA GCGAGGAGTG ACAGCCTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39301340	mCV22803381	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148234855	ENSMUSSNP6730614	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31549774					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82984433 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	within coordinates
Gm17206	predicted gene 17206	1840 bp downstream
Rr404540	regulatory region 404540	within coordinates
Serhl	serine hydrolase-like	within coordinates
Tssr132408	transcription start site region 132408	22 bp downstream
Tssr132409	transcription start site region 132409	49 bp upstream
Tssr132410	transcription start site region 132410	74 bp upstream