rs31552063 SNP Detail

Summary

• ID
  rs31552063
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78375976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTCTGCA TGTGTCTGGG
  AGAAGCCTGT GCAAGCTCAG GAAGATGGAT ACCTGCCCTT GGGTCCCACT GCCTTGTCCC
  TCTTCACCTT GCCTCCCAGG CTAGATGGAT CTCCTCCCTG AAGCAGGAAT CTGGGATGTG
  ACCTCCCACT GGGGAAAGTA TGGACATCAA AATGCCAGAT GCTCACTTTT CACTGCTGCA
  R
  ATGCCCAAGG TGTAGCCAGG AGCAGGAGGA AGACGTAGAG GGACAGGCTC CAGGGAAGAG
  CTATGGTAGC CATCACAGCT GAGAGGAGCT GAGGATGCAA ACCCTAAGTG GAGAAGGAAA
  GAACAAGTCA GAAACCCCAC CCCACTCTAC CCTCTCTCCG CCCAGCCAGA GCAAAGCAGG
  CCCAGGCTCT CTCTCCCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48062993	NES12076861	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31552063					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48062993	NES12076861	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78375976 () rs orientation: forward

Symbol	Name	Function Class
Il2rb	interleukin 2 receptor, beta chain	within coordinates
Rr505292	regulatory region 505292	1677 bp proximal
Rr505293	regulatory region 505293	1970 bp proximal
Tssr135223	transcription start site region 135223	1831 bp downstream
Tssr135224	transcription start site region 135224	1950 bp downstream