rs31556134 SNP Detail

Summary

• ID
  rs31556134
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:190733577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGGCTTGC GCCACCACTG CCCAGCTCCA TAGTTCTTTA
  ACAGCCTTTA CACTTTCAAA AGTCTAAACT CTTTTCTGAG ATTTAATACT ATCTCCCCCC
  M
  CACACACACA CCAGGGTCCA AACATGAATC TTTATTGGCT TTGGCTATTT CAGGGGGATG
  AAGTGGGAGC CATGGGTGGT ACCAATACCA GACTTCATC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45044981	mCV25261058	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss146500594	ENSMUSSNP120868	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
ss320194535	CHEV_1_192825259	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31556134					SNP	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190733577 () rs orientation: forward

Symbol	Name	Function Class
Gm8407	predicted gene 8407	45 bp downstream
Gm37095	predicted gene, 37095	582 bp upstream
Gm70616	predicted gene, 70616	1124 bp upstream
Rr426021	regulatory region 426021	1020 bp proximal