rs31556188 SNP Detail

Summary

• ID
  rs31556188
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:44144446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGT CATGATGTTT GTGCAGGAAT
  W
  GAAACCCTGA CTAAGACATA TGTGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45045736	mCV23636048	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss149020977	ENSMUSSNP1469058	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss319706028	CHEV_1_44162131	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31556188					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:44144446 () rs orientation: forward

Symbol	Name	Function Class
Gm29247	predicted gene 29247	within coordinates
Poglut2	protein O-glucosyltransferase 2	Noncoding-Transcript-Variant