rs31558202 SNP Detail

Summary

• ID
  rs31558202
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:22533114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAAA ACAAGGCAAG AAAGCAAGAA
  M
  AAATTTACTT TCCACTATCT TTGTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46045254	mCV23506715	ABI	CRAMUS_MOUSE	f	SNP	A		A	C
ss145304015	ENSMUSSNP5074962	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss325324148	CHEV_17_22451100	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31558202					SNP	A	A	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:22533114 () rs orientation: forward

Symbol	Name	Function Class
Gm7072	predicted gene 7072	within coordinates
Gm53992	predicted gene, 53992	789 bp upstream
Rr392409	regulatory region 392409	1320 bp downstream
Rr523017	regulatory region 523017	127 bp proximal
Rr523018	regulatory region 523018	694 bp proximal
Tssr146602	transcription start site region 146602	661 bp downstream
Tssr146603	transcription start site region 146603	681 bp downstream