CTAAA ATAGCTTGAT ATTTCACTTT R AGGTTATCCT GGCAAAAGAT ATACC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss49750803 | NES13033693 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | A | G | A | A | G | A | G | G | G | G | ||||
ss119997591 | PARCsnp_1.01064 | PARC_SEQ | INBRED | f | SNP | A | G | ||||||||||||||
ss146156152 | ENSMUSSNP5818337 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||||||||||||||
ss320117006 | CHEV_1_173122081 | CHEVERUD | SCREENING_POP | f | SNP | G | G | ||||||||||||||
SNP Consensus Information | |||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs31558490 | SNP | G | G | A | G | A | A | A | G | G | G | A | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss49750803 | NES13033693 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr1:171019519 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm70111 | predicted gene, 70111 | 1063 bp downstream | ||||||
Pcp4l1 | Purkinje cell protein 4-like 1 | Intron | ||||||
Rr423237 | regulatory region 423237 | 1865 bp distal | ||||||
Rr423238 | regulatory region 423238 | 1604 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|
|