rs31567144 SNP Detail

Summary

• ID
  rs31567144
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78746546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGGCTCAGC ATGGGGAAGG
  AGAAAGATGC CAGAGGCTGA CACTGTGACA GCCAACACAC CTGCCCAGGG GTACAGGAGA
  CTAGTGGTTC ATGCCAGCAG GCCAGGTCCC TTCAGCAGCA CCAGGGCTTA GGTCCTATGT
  GTGCCAGCCC CCATGCGTAT GGAAAAGTCC TTCACTCCCA TGGTTTTCCT TCAGGAACAT
  Y
  AACCTCAGGA CCTAGGGAGC CTTCTACCAC TGTGTGACCT TGGGCAAATC ACTCAGTCTC
  TCTGGGCCTC AGTTTGCTCG TGGGGAAAGC AGAAACTGTA GGTCGGCCCT CTTAGGGTGG
  ATGCGGAAGT TTCCGGGGAG GAAGTGTGTG AGGGCTAAAC TTGGGACCAA CCCCTGTGAA
  GGCTGAGCAG CTATTTGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48065465	NES12075745	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31567144					SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48065465	NES12075745	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78746546 () rs orientation: forward

Symbol	Name	Function Class
Gm26634	predicted gene, 26634	610 bp downstream
Gm63169	predicted gene, 63169	1802 bp upstream
Rr505427	regulatory region 505427	1336 bp proximal