rs31569423 SNP Detail

Summary

• ID
  rs31569423
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165431269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAAGAGAAG GTCTTGCAGT TAGACACAAC CCTACACTCA
  GGTGTTCCTG GTGAGACACC ATAACAAAGC TATGTCTTCT TTCTTCCTCT TGTGTTTTGA
  Y
  GTTAACTCTT ATTCTCTCAG TGCATGCAAC CAGCAAACAG CGAGGTGATG GAGCTGCTCC
  TGTTGTAGTG GGGGTGGGAA CTACAGCGGA GAGAAGCCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45047331	mCV23030880	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss146003155	ENSMUSSNP4204114	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31569423					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165431269 () rs orientation: forward

Symbol	Name	Function Class
Mpzl1	myelin protein zero-like 1	within coordinates
Rr422396	regulatory region 422396	89 bp distal
Tssr14771	transcription start site region 14771	1740 bp upstream