rs31572996 SNP Detail

Summary

• ID
  rs31572996
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:35700464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTACATATA ATAAATAAAT
  CTTAAAAAAA AACAAAACTC AACCTTGACT GAGCTACCTC TATAATTCAG TTAGTACAAC
  AATGTCTTGA ACTGTGAGGA TGTGAATAGA CACTTAGCAG GCAGGCTTGG TAAGTAAATC
  TACAGAGACC TGGGATGGTC ACCTCTTAAC AGGGGAAAAC TGAGACTCTA GTACACTGCT
  R
  CGTCTGTTGA GCACGATGAG TGTCCTTTGT GCTTCCTTTT TGAATTCTTG CCTCATTGTT
  GACAAAACTT GTCATTGATG GAACAGTTAC ATTGTGTGGG ATGTTGTATA ACATCTGGTT
  TGGAGAAATT AAAGCATTAA AATTTTGTTT TACTGTACTC TATAATATTC AACTTTACAC
  CTTGCTTCTT CATTAAGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39302395	mCV23384089	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31572996					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:35700464 () rs orientation: forward

Symbol	Name	Function Class
Rr647	regulatory region 647	1051 bp proximal
Rr309492	regulatory region 309492	907 bp proximal
Vps13b	vacuolar protein sorting 13B	within coordinates