rs31574382 SNP Detail

Summary

• ID
  rs31574382
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34876426 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAACATTAC AGCCATGACT
  TTGTGTCTAT TGGAGTTGAA GGAGTACACT CAGAGCTCCC TGCTTAGTGT ACAATTTGGT
  TGTGTGTTAT AATCCGCAAT GTGTCTGGAC ATTCACCAAA ACTATCCTGA TCTGGTCTTA
  AAAAAAACAA AAAAACCCCA AGAAAGTGAA ACTGCATAAA TAAATAAGTC TACCTGGGGG
  R
  TGGGAGGGGG ATCAATAAAT AGGCTTCTCC ATAGGAATAA AGGACATTGG AACACAAAGC
  CCTCCAGTGC TGTATGATTG ACTAAGCAAC AGCTTTGGAT TTCTAGTCTC CACATACAGC
  TTTCATTTTA GATTAGTTCT CTTGCAGGTG GAATAGCAGG CAGAGAGAGA AGTGCGCACG
  TTTGTTGTTC TCATCCTTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39303282	mCV23392773	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss147562922	ENSMUSSNP7231219	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31574382					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34876426 () rs orientation: forward

Symbol	Name	Function Class
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	52 bp upstream
Tssr133983	transcription start site region 133983	50 bp downstream