rs31574726 SNP Detail

Summary

• ID
  rs31574726
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:27617869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG AGGCCAGCCT GGTCTATAGA
  K
  TGAGTTCCAG GACAGCCAGG ACTGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39303822	mCV24795907	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss147376423	ENSMUSSNP269829	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss324901638	CHEV_15_27547538	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31574726					SNP	T	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:27617869 () rs orientation: forward

Symbol	Name	Function Class
Otulin	OTU deubiquitinase with linear linkage specificity	within coordinates
Rr500146	regulatory region 500146	1077 bp proximal
Tssr133864	transcription start site region 133864	1484 bp downstream