rs31574965 SNP Detail

Summary

• ID
  rs31574965
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:67878487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GTGGGGTTGG GGGAGGGGTC CTGTCTTGTT TCGATTTAGC ACTTCTTACC
  M
  GAGCAGTGAC AGCGCGAGAG ATGCTTCTGG GTGGAAATAT TTAAATTAGG           
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46046479	mCV25449869	ABI	CRAMUS_MOUSE	f	SNP	A	C	A					A		A
ss51900541	NES14913236	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		C		A	A		A	A	C		A
ss322245098	CHEV_7_75373625	CHEVERUD	SCREENING_POP	f	SNP													A				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31574965					SNP	A	C	A	A	A	A	A	A	C	A	A	A	A	A	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51900541	NES14913236	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:67878487 () rs orientation: forward

Symbol	Name	Function Class
Igf1r	insulin-like growth factor I receptor	within coordinates
Tssr67120	transcription start site region 67120	617 bp downstream
Tssr67121	transcription start site region 67121	1556 bp upstream