rs31578415 SNP Detail

Summary

• ID
  rs31578415
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:72286609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATA TAATTCTTAA CAAATTAAGA
  Y
  TGAACACTCA TGCCAGTTCT AGTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45548080	mCV25391151	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss135302046	ENSMUSSNP1910227	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss320797509	CHEV_3_72183198	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31578415					SNP	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:72286609 () rs orientation: forward

Symbol	Name	Function Class
Rr578287	regulatory region 578287	1140 bp proximal