TCTTG GGCATTCTTA AGAGAAGCCA Y GTGTCCTTCA GTGCATCCCT CCAAT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss39304289 | mCV25401749 | ABI | CRAMUS_MOUSE | f | SNP | C | C | T | T | ||
ss148481933 | ENSMUSSNP3181876 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | T | |||
ss325085118 | CHEV_15_100879172 | CHEVERUD | SCREENING_POP | f | SNP | C | T | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs31581048 | SNP | C | C | T | T | C | T |
Location: Chr15:100946622 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi7763 | CpG island 7763 | 1129 bp distal | ||||||
Fignl2 | fidgetin-like 2 | 1453 bp downstream | ||||||
Rr509881 | regulatory region 509881 | 1893 bp distal | ||||||
Rr509882 | regulatory region 509882 | 854 bp distal | ||||||
Tmdd1 | transmembrane and death domain 1 | 1344 bp upstream | ||||||
Tssr136507 | transcription start site region 136507 | 1365 bp upstream | ||||||
Tssr136508 | transcription start site region 136508 | 1356 bp upstream | ||||||
Tssr136509 | transcription start site region 136509 | 1337 bp upstream | ||||||
Tssr136510 | transcription start site region 136510 | 1312 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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