rs31585115 SNP Detail

Summary

• ID
  rs31585115
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127655275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTAGAGCT TGAAAATGAA
  ATGCCTGGGG AGCACTGTAC CGGGCCAAGC CCAGCTCTAT CTGAACATCT CATAAATGTC
  CCGACAAGCA TAGCCTGACA GCGAAGAAAA TGTAGGAGAA CCAGTTCTGA AATGCAGTGA
  GACGGAATAA AGGAAAGCTC AGGCTCAGCT GCTCACGGAA GTTCACATGC ACAAGCATCC
  K
  AAGCAAGGAG CGACTGTTCG GGCATATGTA TGTACTGTTC GGGCGTATGT AGAAATGTGT
  GTGTGCAGAA AGGAAGTAGG AAGGGGTGGG CCAGACTGAA AATACTGATG GTCCACATAG
  AACACTTTGA ATGGCAGAGT AAGACTGATC AGACAACTCA AAGAAATATA TTACATATGC
  AACATGCTTT TGTAGACTAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45548886	mCV24302111	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss135873392	ENSMUSSNP3026032	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320957597	CHEV_3_127564544	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31585115					SNP	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127655275 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Gm43652	predicted gene 43652	1558 bp downstream
Rr584887	regulatory region 584887	within coordinates
Rr584888	regulatory region 584888	887 bp proximal
Tssr31614	transcription start site region 31614	11 bp downstream