rs31587836 SNP Detail

Summary

• ID
  rs31587836
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82986024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCG TGGGCTGAAG GGCCGTGGAG
  R
  GGTGACGGCA GCCATGCCGA GCCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39305653	mCV22803184	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss148234880	ENSMUSSNP4402116	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss325035689	CHEV_15_82932253	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31587836					SNP	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82986024 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	1332 bp distal
Gm17206	predicted gene 17206	249 bp downstream
Rr308146	regulatory region 308146	177 bp proximal
Rr312184	regulatory region 312184	823 bp distal
Rr404540	regulatory region 404540	1503 bp downstream
Serhl	serine hydrolase-like	within coordinates
Tssr132408	transcription start site region 132408	1613 bp downstream
Tssr132409	transcription start site region 132409	1520 bp downstream
Tssr132410	transcription start site region 132410	1505 bp downstream