rs31591379 SNP Detail

Summary

• ID
  rs31591379
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:118434600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAACTGCAG CCATGAGATG
  AGCATAGGCG GTAGGTACCA CAGGGGAGTA CCCAAGGTGC TTTGCAGCCC TCCGTGGGGC
  AAGTTGCAGG TTGTGTGTGT GTGTGTGCGT GCGCTCACAT GCAGGAGAGG GAAGCTGGGG
  AAGGCTTGAC AAAGACAAAG AGTCCTTAAG AATCCAAAGT AGCTTATAGA GTATTCTAAA
  Y
  TGCTTCAGTA AGTCGCTTCA TGTATCCAGC TAGCTTTCCA TAAAGCTTTT TATTTTATTT
  TATATTTTAT TTTACATATT TTTAAATTGA AAATTTTAAA ATTTGATGGA CGGCAAGGTG
  GATCCAGGAG AAGTAGATTT ATCTTAAGCA AAGATCTTTG TTTTAAGCTC CAAATGAAGG
  GTCCATGGAC AGTGACATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47568610	NES11190299	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31591379					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47568610	NES11190299	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:118434600 () rs orientation: forward

Symbol	Name	Function Class
Gm63722	predicted gene, 63722	1465 bp downstream
Hsd17b2	hydroxysteroid (17-beta) dehydrogenase 2	within coordinates
Rr670930	regulatory region 670930	1341 bp distal