rs31592948 SNP Detail

Summary

• ID
  rs31592948
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149757194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGACCACCCA TTAACATACT CCCTCCTAAT TATTCTTTCC
  ATTCTACTCA GGAAAATACT AAGAGAAGAA CTTCATTTTA ATCAGTGGCC CATGTTTTCT
  R
  ATTTTGCACA TTAGACTGAC GGCCAAGTCA ATGCTATGCA TTCCATATGC ATCACTAACG
  TGAGTTGGTG TCTTTCTCTA ATCTGTGTAC AGACTTTCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45549827	mCV24048088	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss136077755	ENSMUSSNP6483736	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31592948					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149757194 () rs orientation: forward

Symbol	Name	Function Class
Rr587358	regulatory region 587358	842 bp distal
Tssr32377	transcription start site region 32377	1826 bp downstream