rs31593814 SNP Detail

Summary

• ID
  rs31593814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27798994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTCACAC TCCAGGCACT
  TCACACTGAT TTCCACAGGG GCTGCATCAG CTAACGTCCC CCCCAGCCGT GGATAAGGCT
  TTCCTTGCCC TGAGCCCTCA CCAGCACTTG CTCATTTCCG TGATGACGGT CATTCTGGCT
  GGGCTGACAT GAATTCTCGT TTTAAGTTAA ATCAAGGATT TTGGCCACTT GCTCGCTGAT
  Y
  GTGTCCTTCC TTTGAAAAGT TTGTTTTCTG CCCATCTACT TGCTAAATTA CTTGCTGTCT
  TGTGTTAATT TTTTTTTTTG AGTTCTTTAT GTAGTCTGGA TATTAGTCTC CTGTCAGATT
  AATGGCTAAC GACTTCTCTC CCGTTCTGTG GCCTTTCCCT TCACTCTCTA TGCAGAAGCT
  TTTTGATCTA GTGAAGTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss46048585	mCV25405215	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss322125334	CHEV_7_28884588	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs31593814					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27798994 () rs orientation: forward

Symbol	Name	Function Class
Fcgbp	Fc fragment of IgG binding protein	within coordinates
Gm10935	predicted gene 10935	91 bp downstream
Gm21925	predicted gene, 21925	within coordinates
Rr155708	regulatory region 155708	1007 bp proximal
Rr164628	regulatory region 164628	1601 bp distal
Rr170288	regulatory region 170288	921 bp proximal
Tssr65362	transcription start site region 65362	1685 bp upstream
Tssr65363	transcription start site region 65363	1726 bp upstream