rs31594156 SNP Detail

Summary

• ID
  rs31594156
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:67233094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTC TTCTCCCCCT CACCCCCCCA
  M
  ATGCCATGTT GGTTTAATTA TGACT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45049243	mCV24328050	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	C
ss144540179	ENSMUSSNP4689889	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss319762276	CHEV_1_67240509	CHEVERUD	SCREENING_POP	f	SNP						A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31594156					SNP	C	C	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67233094 () rs orientation: forward

Symbol	Name	Function Class
Cps1	carbamoyl-phosphate synthetase 1	within coordinates
Tssr7226	transcription start site region 7226	637 bp downstream
Tssr7227	transcription start site region 7227	161 bp downstream
Tssr7228	transcription start site region 7228	111 bp downstream