rs31595018 SNP Detail

Summary

• ID
  rs31595018
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91176427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAC TATAATGGCT ATTCCTGGTT
  R
  TCAACTTGAC TATATCTGGA ATGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45049791	mCV24389917	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss144943392	ENSMUSSNP3145568	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss319839832	CHEV_1_93145282	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31595018					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91176427 () rs orientation: forward

Symbol	Name	Function Class
Cpgi571	CpG island 571	1191 bp proximal
Rr366958	regulatory region 366958	1240 bp upstream
Rr415585	regulatory region 415585	764 bp distal
Rr415586	regulatory region 415586	within coordinates
Rr415587	regulatory region 415587	1116 bp proximal
Rr415588	regulatory region 415588	1872 bp proximal
Tssr8065	transcription start site region 8065	1488 bp upstream
Tssr8066	transcription start site region 8066	1592 bp upstream
Tssr8067	transcription start site region 8067	1606 bp upstream
Tssr8068	transcription start site region 8068	1777 bp upstream
Tssr8069	transcription start site region 8069	1870 bp upstream
Tssr12938	transcription start site region 12938	1335 bp downstream
Ube2f	ubiquitin-conjugating enzyme E2F (putative)	985 bp upstream