rs3159674 SNP Detail

Summary

• ID
  rs3159674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100823624 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CACTG TGGACGCTTC ATTTACACTC
  R
  CTCATGTCCT TCTGTGAACT CCCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135542887	ENSMUSSNP5621718	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs3159674					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100823624 () rs orientation: reverse

Symbol	Name	Function Class
Gm40108	predicted gene, 40108	1088 bp downstream
Rr581925	regulatory region 581925	535 bp proximal
Rr581926	regulatory region 581926	629 bp proximal