rs31607279 SNP Detail

Summary

• ID
  rs31607279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:8359765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggctgctcc agctgttcct gtagcaccca
  gtgagacagc aaagcctagt tcaatgagct ttctgccatc tgcaaggtga gttctttggg
  ttcatagaga taaacctggg ggacaatcat cacaggggtg caggagtctt gaaaaagggg
  R
  tcaatacagg cacctgtagt gcctttgcat cagaggaggg caggaggttt aacacatagt
  gatttgatga ttgtgatgta atagacacac taagatgggg tttttgagga gggccctaca
  aggcaaagtg cgggaaggag gtcaaacagg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45051132	mCV24663469	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss148536848	ENSMUSSNP3857045	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
ss319624971	CHEV_1_8279622	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31607279					SNP	A	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:8359765 () rs orientation: forward

Symbol	Name	Function Class
Gm70752	predicted gene, 70752	120 bp upstream
Rr407573	regulatory region 407573	1784 bp distal