rs31610519 SNP Detail

Summary

• ID
  rs31610519
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:74593074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCGTCCCG CCGTGACCCG
  CCCCGCCCCG AGAAAAGCGA AAGCCGCTAA CGCAGAGGAC CCAGACTAGG CCATCGAGGA
  CGCGCGCAGG GGGGAACCAG TATCTGTGCG AGCTACTCCA GCTCACGGCG CCGCTGCCTC
  TGGAGTACTC CCCCTCGGAC TGCTGGAAGA GTTGGTGCGC TCCAGTCCTC GGAGCTCCCA
  R
  GCTTCAGGGC CGGCCGGCAG CAGGCAACCT GCGCAGCGGG CTCCTGGACA CCAGGTGCCC
  GCTGCCAAGA TGCTGGAGCT GTTGGTGGCG TCGTTATCCC TGGCGCTCGC CTTCTTTGCG
  CTGCTGGACG GCTGGTACCT GGTGCGCGTG CCGTGTGCTG TTCTGCGCGC ACGCTTGCTG
  CAGCCGCGGG TCCGCGACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss39307197	mCV22743511	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss148149558	ENSMUSSNP3369749	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31610519					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:74593074 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7176	CpG island 7176	within coordinates
Them6	thioesterase superfamily member 6	9 bp upstream
Tssr131582	transcription start site region 131582	within coordinates
Tssr131583	transcription start site region 131583	13 bp upstream
Tssr131584	transcription start site region 131584	337 bp upstream
Tssr131585	transcription start site region 131585	466 bp upstream
Tssr131586	transcription start site region 131586	472 bp upstream