rs31612328 SNP Detail

Summary

• ID
  rs31612328
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45293142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGG GCGGGGCTGT GTACACATGG
  R
  CCAATAAAGA GAAGAGAAAG AGAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46050484	mCV25292118	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss149139935	ENSMUSSNP6730495	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31612328					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45293142 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19076	CpG island 19076	within coordinates
Cpgi19077	CpG island 19077	354 bp proximal
Mamstr	MEF2 activating motif and SAP domain containing transcriptional regulator	within coordinates
Rr400317	regulatory region 400317	within coordinates
Tssr66603	transcription start site region 66603	1931 bp downstream
Tssr66604	transcription start site region 66604	235 bp upstream