rs31618431 SNP Detail

Summary

• ID
  rs31618431
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:67017446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCAGCTGG GTGTGTACAT TGCAGCTGGG TGAGGAATTT
  CCCCGAAGAT GCCTTTCCTG CCACATGCAA ACCCATCCCT GGGGCACTCT CTCTCTCTCT
  S
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTATG ACCCTCCCTT CCCTGGCTCA
  TTCTCACATC TAAGTCATGG GTAGCTGATG AAGTGTGGC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39308138	mCV22937589	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss148036205	ENSMUSSNP3258146	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31618431					SNP	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:67017446 () rs orientation: forward

Symbol	Name	Function Class
Gm63615	predicted gene, 63615	within coordinates
Rr1092	regulatory region 1092	1964 bp distal
Rr404420	regulatory region 404420	within coordinates
St3gal1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	within coordinates
Tssr134620	transcription start site region 134620	856 bp downstream