rs31619408 SNP Detail

Summary

• ID
  rs31619408
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:139517536 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA TGTAAAATGA ATAATAAATA
  Y
  ATAAAAAATA ATAAATACCA TTCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45552068	mCV23924254	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss135971269	ENSMUSSNP1131759	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss320985528	CHEV_3_139474739	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31619408					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:139517536 () rs orientation: forward

Symbol	Name	Function Class
Gm43678	predicted gene 43678	336 bp downstream
Rr74613	regulatory region 74613	975 bp proximal