rs31619848 SNP Detail

Summary

• ID
  rs31619848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:33020797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTA GTTTTAACTC TTCTGCTTTG
  Y
  ACTCTTTAAC TGGAGCACAT GTGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45552468	mCV23042982	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31619848					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33020797 () rs orientation: forward

Symbol	Name	Function Class
Gm37459	predicted gene, 37459	within coordinates
Pex5l	peroxisomal biogenesis factor 5-like	Intron
Rr575039	regulatory region 575039	773 bp distal
Rr575040	regulatory region 575040	916 bp distal
Rr575041	regulatory region 575041	897 bp proximal
Rr575042	regulatory region 575042	1001 bp proximal