rs31628372 SNP Detail

Summary

• ID
  rs31628372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:165851746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTTACTC TGCATATATG
  ACCTAAAGGA TCAATAGTTA GATGATAGTT TACAAATATC ACACACAAAA AAAGCTCAAG
  GCCAGAGGCC ATGTACCTTG TCTTAATTTT GTGCTATTAA TGAGAGACAT ATCAGAATGA
  AGTCTTTGGA GAAAATTAAT TCTGTGACTG TGGAGAAAAT TTCTACAGCT AAGGCTGTGA
  R
  ATCAAAGAAT TTGCATGCGG TTACAGTCAA AAGGAATTAG GGCCCGGTGT GACAAGAAAG
  GTGCTGTGCC TACAGTCCTA GCCACTCAGG AACCGGAGGG CAGAGTGTCG TTCATGAATT
  TGAAACCAGG CTGAGCTACA TAGAGAGACT CTGACTCAGA AGGATAAAGA GAAAGGAGGA
  AGAAAAGGGA GGGGGCAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47072116	NES11154688	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31628372					SNP	A	A	A	A	A	G	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47072116	NES11154688	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:165851746 () rs orientation: forward

Symbol	Name	Function Class
Gm8817	predicted gene 8817	within coordinates