rs31630107 SNP Detail

Summary

• ID
  rs31630107
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:169312601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTG TCTGCAGCTA CCCAGTCCAA
  R
  TGCAACAGGG CTTCTTTAAA GAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45053725	mCV24848516	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss146098957	ENSMUSSNP2827352	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss320102000	CHEV_1_171415163	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31630107					SNP	A	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:169312601 () rs orientation: forward

Symbol	Name	Function Class
Gm53643	predicted gene, 53643	within coordinates
Gm71126	predicted gene, 71126	within coordinates
Rr422941	regulatory region 422941	234 bp proximal
Rr422942	regulatory region 422942	806 bp proximal