rs31636021 SNP Detail

Summary

• ID
  rs31636021
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73058038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA GAACTAATGG GGATGCGGTG
  M
  GGTGGGGGGG GGGGGGAGGT GGTGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39309971	mCV24807039	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31636021					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73058038 () rs orientation: forward

Symbol	Name	Function Class
Ago2	argonaute RISC catalytic subunit 2	1261 bp upstream
Cpgi7161	CpG island 7161	445 bp distal
Rr369949	regulatory region 369949	745 bp upstream
Rr404436	regulatory region 404436	918 bp downstream
Rr504021	regulatory region 504021	764 bp distal
Rr504022	regulatory region 504022	931 bp distal
Rr504023	regulatory region 504023	717 bp distal
Rr504024	regulatory region 504024	237 bp proximal
Rr504025	regulatory region 504025	823 bp proximal
Tssr134684	transcription start site region 134684	1218 bp upstream
Tssr134685	transcription start site region 134685	933 bp upstream
Tssr134686	transcription start site region 134686	906 bp upstream
Tssr134687	transcription start site region 134687	872 bp upstream
Tssr134688	transcription start site region 134688	838 bp upstream