rs31639162 SNP Detail

Summary

• ID
  rs31639162
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130553018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTT TCTTCCTGGA AATTGGGGCA
  R
  GGGGCTGGAT TAAAGGGTGT GTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45554522	mCV22960159	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss135899335	ENSMUSSNP5534617	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss320966485	CHEV_3_130462287	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31639162					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130553018 () rs orientation: forward

Symbol	Name	Function Class
Gm42997	predicted gene 42997	within coordinates
Gm43522	predicted gene 43522	921 bp upstream
Gm43524	predicted gene 43524	1611 bp downstream
Gm65129	predicted gene, 65129	within coordinates
Rr585206	regulatory region 585206	231 bp distal
Rr585207	regulatory region 585207	1325 bp proximal
Rr585208	regulatory region 585208	1556 bp proximal