rs31641220 SNP Detail

Summary

• ID
  rs31641220
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:186138095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGC TGACAGCTGG GGCTCCTGTT
  S
  CCAAGATCTC TGCAAATGGC CTGGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45054817	mCV23951777	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss146455029	ENSMUSSNP2971348	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320182872	CHEV_1_188229777	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31641220					SNP	G	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:186138095 () rs orientation: forward

Symbol	Name	Function Class
Gm35341	predicted gene, 35341	1922 bp upstream
Rr425482	regulatory region 425482	1818 bp proximal
Rr425483	regulatory region 425483	1919 bp proximal