rs31642753 SNP Detail

Summary

• ID
  rs31642753
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:84337471 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCAGTCACA AGAACAGTGA GTCTTCCTGA TTAAAGGAAG
  GAAGCAGAAT CGTAACGTTT TCATCTCTAT TTTATTACTG ATTGCCTACA ACTTTCTACC
  R
  CGATCTACAG TATTTACTTT TCGACAGGCA ACTTGGGCAA CAACAGCTGC AAGAAGAAAA
  GTTCCCAGAG TACACTTGTT AGAAGCAAAA CAAGAAACA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46053236	mCV23881098	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss322297945	CHEV_7_91836773	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31642753					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:84337471 () rs orientation: forward

Symbol	Name	Function Class
2610206C17Rik	RIKEN cDNA 2610206C17 gene	1377 bp upstream
Cpgi19383	CpG island 19383	1043 bp proximal
Rr400423	regulatory region 400423	1551 bp upstream
Rr650631	regulatory region 650631	5 bp proximal
Rr650632	regulatory region 650632	949 bp proximal
Rr650633	regulatory region 650633	1492 bp proximal
Rr650634	regulatory region 650634	1684 bp proximal
Tssr73444	transcription start site region 73444	1531 bp downstream
Tssr73445	transcription start site region 73445	1560 bp downstream
Tssr73446	transcription start site region 73446	1582 bp downstream
Tssr73447	transcription start site region 73447	1641 bp downstream
Tssr73448	transcription start site region 73448	1671 bp downstream
Tssr73449	transcription start site region 73449	1685 bp downstream
Tssr73450	transcription start site region 73450	1717 bp downstream
Zfand6	zinc finger, AN1-type domain 6	within coordinates