rs31645326 SNP Detail

Summary

• ID
  rs31645326
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161322375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTGGGTA TCTGCTTTCC CCAGTTCTCA
  TTCCATCAGA GAACGAGTTC TAGCCTCATG GAGGAAATGC CTTTGAGAGA ATCAAGTCCT
  CAAAGGGCAG AGAGGTGCAA GAAGTCATGG CTCTTGTGCA TAGTGGCTCT GTTACTGATG
  Y
  TGCTCTGTTC TTTGGGTACA CTGATCTATA CTTCACTCAA GGTAAGGTGG TCATAGAGTC
  TACAGCTGCT AATTATATCA TATAAAGGTT ATTTATTTGT TAGTCTGGTT ATTATCACTG
  CCATTCAGCA TTGCTAGAGG TAGTGGGAAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45054453	mCV23101331	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss145915201	ENSMUSSNP4677077	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320080917	CHEV_1_163424937	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31645326					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161322375 () rs orientation: forward

Symbol	Name	Function Class
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	within coordinates
Tssr9690	transcription start site region 9690	150 bp downstream