rs31646033 SNP Detail

Summary

• ID
  rs31646033
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122361350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAAACAGAG TATTAATATA CCTGCGAAGT CTAAATCAGC
  ATTGGTGATT AAAAATCATT GACACTTAAA TAAAAATAGA ATCTAAGTTT TAAATATTCA
  Y
  TTTAACAGGA AAACATAAAA ACATAGCAAA TATATGCACG AGCTTTCAAA ATGCCAAAGA
  TTTGCATAGT ATGAAGAAAC ACCACAGTAT CTTGCATGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45555661	mCV22967127	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss135744531	ENSMUSSNP6833463	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss320912813	CHEV_3_122270619	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31646033					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122361350 () rs orientation: forward

Symbol	Name	Function Class
Fnbp1l	formin binding protein 1-like	within coordinates
Gm43569	predicted gene 43569	within coordinates
Rr74164	regulatory region 74164	732 bp proximal
Rr78947	regulatory region 78947	750 bp distal
Rr375679	regulatory region 375679	1559 bp downstream
Tssr31506	transcription start site region 31506	962 bp downstream
Tssr35455	transcription start site region 35455	1084 bp downstream